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Similarly to PostgreSQL, you can use intelmq_psql_initdb to create initial SQL statements from harmonization.conf. The script will create the required table layout and save it as /tmp/initdb.sql.

Create the new database (you can ignore all errors since SQLite doesn't know all SQL features generated for PostgreSQL):

sqlite3 your-db.db
sqlite> .read /tmp/initdb.sql

Then, set the database parameter to the your-db.db file path.

To output data to SQLite use SQL Output Bot with parameter engine set to sqlite. For more information see SQL Output Bot documentation page.